LibraryMatching.Pearson Class Reference

Public Member Functions
	__init__ (self, plugin)
	generate_result (self, request, wavenumbers, spectrum)
	a simple correlation routine
	lazy_load_library (self)
	process (self, request, wavenumbers, spectrum)
	reset (self)

Public Attributes
list	best_library_spectrum = None
	best_library_wavenumbers = None
list	compound_names = []
	ctl = self.plugin.ctl
list	library_spectra = None
str	marquee_message = "Select library directory to perform Raman matching"
	plugin = plugin

Constructor & Destructor Documentation

__init__()

LibraryMatching.Pearson.__init__	(		self,
			plugin )

Member Function Documentation

generate_result()

LibraryMatching.Pearson.generate_result	(		self,
			request,
			wavenumbers,
			spectrum )

a simple correlation routine

1. find wavenumber overlap
2. interpolate to same wavenumber axis
3. do Pearson correlation

library spectra as list of pandas data frames self.library_spectra = list of pd-df expects return to be used as follows: for result in match_result: compounds.append(result["Name"]) scores.append(result["Score"])

lazy_load_library()

LibraryMatching.Pearson.lazy_load_library

(

self

)

process()

LibraryMatching.Pearson.process	(		self,
			request,
			wavenumbers,
			spectrum )

reset()

LibraryMatching.Pearson.reset

(

self

)

Member Data Documentation

best_library_spectrum

list LibraryMatching.Pearson.best_library_spectrum = None

best_library_wavenumbers

LibraryMatching.Pearson.best_library_wavenumbers = None

compound_names

list LibraryMatching.Pearson.compound_names = []

ctl

LibraryMatching.Pearson.ctl = self.plugin.ctl

library_spectra

LibraryMatching.Pearson.library_spectra = None

marquee_message

str LibraryMatching.Pearson.marquee_message = "Select library directory to perform Raman matching"

plugin

LibraryMatching.Pearson.plugin = plugin

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The documentation for this class was generated from the following file:

• plugins/Raman/LibraryMatching.py